Visualization of peptide and protein identification results from multip download to 10.14

Main category \ Education

Sub category \ Science

Developer \ CompOmics

Filesize \ 113357

Title \ PeptideShaker

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► PeptideShaker vers 1.16.39

esimsa2D BUG FIX: Corrected bug in the PTM localization. Changes in PeptideShaker 0.37.3 (January 29. 2015): FEATURE IMPROVEMENT: Made it possible to cancel the batch loading in the table models. Changes in PeptideShaker 1.3.4 (January 6. 2016): Changes in PeptideShaker 0.22.0 (June 19. 2013):

Official:

(106555 KB)

(116757 KB)

Open PRIDE Inspector by clicking on the file in the tool's working directory -> Private Download -> ProteomeXchange -> PX reviewer account details. You can open the PRIDE XML and mzIdentML 'RESULT' files with PRIDE Inspector or just download all the files that you wish to investigate. FEATURE IMPROVEMENT: Square brackets are now allowed in the path were PeptideShaker is installed. BUG FIX: Fixed a bug in the progress bar when loading spectrum files when loading a project. Article FEATURE IMPROVEMENT: Updated Ensembl to version 89. We recommend using the PSI-MOD ontology to report protein modifications in PRIDE XML files as result files for Complete PX Submissions. In case the protein modifications you were using or have discovered throughout your study have not been reported in the ontology we recommend adding the modification first to the ontology. For that, we need the proposed name, delta mass and/or a reference or web URL (if it is a commercial product). NEW FEATURE: Added a new Plotting dialog, opened by right clicking in most tables. BUG FIX: Fixed a bug where the BugReport could not locate the log file.

Download

1.16.43

1.16.35

Software

1.18.39

Free

1.16.40

1.19.39

Update

1.16.35

App

1.19.39

[11239 kbytes] 2.11.2

[24586 kbytes] 3.22

[72591 kbytes] 4.12.2